BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038H08LP1|AL430622
(287 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig363 177 1e-44
>3x_Contig363
Length = 1726
Score = 177 bits (89), Expect = 1e-44
Identities = 186/209 (88%), Gaps = 7/209 (3%)
Strand = Plus / Minus
Query: 1 ataatagccggcttgaatacaaggaaaaatacaacgcattcttaggactgctattaccat 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 227 ataatagccggcttgaatacaaggaaaaatacaa-gcattcttaggactgctatta-cat 170
Query: 61 tgctgacaagatggaaattgtggatcttgacatgcaataatgaatataatgaacatatag 120
|||||| ||||||||||||||||||||||||||||| | ||| | | || | ||| |
Sbjct: 169 tgctga-aagatggaaattgtggatcttgacatgcatttttgatttttctgcccctattg 111
Query: 121 tattatgcaataaaatggccatttctagaaagaaattccaaatgcttgttcccatgaata 180
| || |||||||| |||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 110 ttttttgcaataatttggccatttctagaaagaaatt-caaatgcttgttccc-tgaata 53
Query: 181 ttgaggcatgcccaaatttgatgggtgtt 209
||||||| || |||||||| |||||||||
Sbjct: 52 ttgaggc-tg-ccaaattttatgggtgtt 26
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2427
Number of Sequences: 1807
Number of extensions: 2427
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 287
length of database: 10,358,551
effective HSP length: 16
effective length of query: 271
effective length of database: 10,329,639
effective search space: 2799332169
effective search space used: 2799332169
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 49 (97.9 bits)